Differential expression result

The differential expression result was calculated using the comparison TiO2_BSA_TNF of data set GSE14910.


With the default cutt-offs adjusted P-value <=0.05 and abs[logFC] >=0.585 or abs(FC) >=1.5, there are 197 genes in RED detected as differentially expressed genes (DEGs). The genes were ordered by ascending Adj_P_Value.



Table columns explanation:


Ensembl ID - Ensembl gene identifier based on Ensembl database.


HGNC automatic name and HGNC curated name - Most human genes have an associated HGNC symbol from the HUGO Gene Nomenclature Committee. If the gene or transcript comes from the Ensembl Genebuild's automated pipeline only, the HGNC symbol will have HGNC automatic associated with it. If it is a manually curated transcript from Havana/Vega, it will have HGNC curated associated with it. (Ref: link).


log2_fold_change - log2 value of the fold change (FC) in expression between sample groups. E.g. 1 means that one group had on average half the expression of the other group. -1 reverses the direction of the comparison.


AveExpr - average (log2) expression value across both sample groups. (*Available for one channel data.)


Adj_P_Value - P value for differential expression adjusted using the Benjamini-Hochberg correction to control the false discovery rate (FDR).



Page 4 of 993, showing 20 records out of 19841 total, starting on record 61, ending on 80.


First| | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last
Ensembl ID HGNC automatic name HGNC curated name log2_fold_change Adj_P_Value
1 ENSG00000073605 GSDMB 1.944e-2 8.545e-1
2 ENSG00000144567 FAM134A 5.542e-2 5.329e-1
3 ENSG00000149016 TUT1 4.955e-2 5.525e-1
4 ENSG00000206075 SERPINB5 5.001e-2 6.333e-1
5 ENSG00000108381 ASPA -1.658e-1 9.614e-2
6 ENSG00000081923 ATP8B1 4.870e-3 9.669e-1
7 ENSG00000130649 CYP2E1 -1.251e-1 2.369e-1
8 ENSG00000103275 UBE2I -2.051e-1 2.517e-1
9 ENSG00000067334 DNTTIP2 -1.677e-1 3.102e-1
10 ENSG00000157343 C6orf81 -3.419e-2 7.593e-1
11 ENSG00000167491 GATAD2A 3.002e-1 2.960e-2
12 ENSG00000162378 ZYG11B -5.809e-3 9.621e-1
13 ENSG00000153879 CEBPG -3.751e-1 7.681e-2
14 ENSG00000134684 YARS 2.050e-1 3.337e-1
15 ENSG00000173950 C3orf21 -9.871e-2 3.178e-1
16 ENSG00000249437 -7.320e-2 6.267e-1
17 ENSG00000196126 HLA-DRB1 9.121e-3 9.248e-1
18 ENSG00000169224 C1orf150 1.299e-1 2.165e-1
19 ENSG00000197748 C10orf79 2.892e-2 7.671e-1
20 ENSG00000127241 MASP1 -5.618e-2 5.930e-1
First| | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last



Page 4 of 993, showing 20 records out of 19841 total, starting on record 61, ending on 80


Download full differential expression gene result:


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