Differential expression result

The differential expression result was calculated using the comparison TiO2_BSA_TNF of data set GSE14910.


With the default cutt-offs adjusted P-value <=0.05 and abs[logFC] >=0.585 or abs(FC) >=1.5, there are 197 genes in RED detected as differentially expressed genes (DEGs). The genes were ordered by ascending Adj_P_Value.



Table columns explanation:


Ensembl ID - Ensembl gene identifier based on Ensembl database.


HGNC automatic name and HGNC curated name - Most human genes have an associated HGNC symbol from the HUGO Gene Nomenclature Committee. If the gene or transcript comes from the Ensembl Genebuild's automated pipeline only, the HGNC symbol will have HGNC automatic associated with it. If it is a manually curated transcript from Havana/Vega, it will have HGNC curated associated with it. (Ref: link).


log2_fold_change - log2 value of the fold change (FC) in expression between sample groups. E.g. 1 means that one group had on average half the expression of the other group. -1 reverses the direction of the comparison.


AveExpr - average (log2) expression value across both sample groups. (*Available for one channel data.)


Adj_P_Value - P value for differential expression adjusted using the Benjamini-Hochberg correction to control the false discovery rate (FDR).



Page 5 of 993, showing 20 records out of 19841 total, starting on record 81, ending on 100.


First| | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last
Ensembl ID HGNC automatic name HGNC curated name log2_fold_change Adj_P_Value
1 ENSG00000169252 ADRB2 -2.254e-1 2.389e-1
2 ENSG00000139725 RHOF 3.439e-1 7.640e-2
3 ENSG00000181904 C5orf24 2.870e-1 7.010e-2
4 ENSG00000155508 CNOT8 -5.945e-2 5.696e-1
5 ENSG00000145908 ZNF300 -2.715e-1 5.716e-2
6 ENSG00000162409 PRKAA2 -1.869e-1 3.867e-1
7 ENSG00000122136 OBP2A -1.823e-2 8.940e-1
8 ENSG00000185946 RNPC3 -1.427e-1 1.588e-1
9 ENSG00000057663 ATG5 -2.948e-1 3.104e-2
10 ENSG00000133101 CCNA1 9.168e-2 3.650e-1
11 ENSG00000120742 SERP1 -2.220e-1 7.476e-2
12 ENSG00000069535 MAOB 2.546e-1 2.561e-1
13 ENSG00000127995 CASD1 -1.556e-1 1.097e-1
14 ENSG00000117560 FASLG 4.625e-2 5.769e-1
15 ENSG00000062650 WAPAL 2.955e-2 7.371e-1
16 ENSG00000110218 PANX1 4.706e-1 1.125e-1
17 ENSG00000162073 PAQR4 2.292e-1 6.108e-2
18 ENSG00000176387 HSD11B2 -9.874e-3 9.736e-1
19 ENSG00000183091 NEB 1.029e-1 4.645e-1
20 ENSG00000136021 SCYL2 -1.742e-1 1.120e-1
First| | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last



Page 5 of 993, showing 20 records out of 19841 total, starting on record 81, ending on 100


Download full differential expression gene result:


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