Differential expression result

The differential expression result was calculated using the comparison TiO2_BSA_TNF of data set GSE14910.


With the default cutt-offs adjusted P-value <=0.05 and abs[logFC] >=0.585 or abs(FC) >=1.5, there are 197 genes in RED detected as differentially expressed genes (DEGs). The genes were ordered by ascending Adj_P_Value.



Table columns explanation:


Ensembl ID - Ensembl gene identifier based on Ensembl database.


HGNC automatic name and HGNC curated name - Most human genes have an associated HGNC symbol from the HUGO Gene Nomenclature Committee. If the gene or transcript comes from the Ensembl Genebuild's automated pipeline only, the HGNC symbol will have HGNC automatic associated with it. If it is a manually curated transcript from Havana/Vega, it will have HGNC curated associated with it. (Ref: link).


log2_fold_change - log2 value of the fold change (FC) in expression between sample groups. E.g. 1 means that one group had on average half the expression of the other group. -1 reverses the direction of the comparison.


AveExpr - average (log2) expression value across both sample groups. (*Available for one channel data.)


Adj_P_Value - P value for differential expression adjusted using the Benjamini-Hochberg correction to control the false discovery rate (FDR).



Page 993 of 993, showing 1 records out of 19841 total, starting on record 19841, ending on 19841.


First| | 985 | 986 | 987 | 988 | 989 | 990 | 991 | 992 | 993 |Next >> |
Ensembl ID HGNC automatic name HGNC curated name log2_fold_change Adj_P_Value
1 ENSG00000170291 C17orf81 -1.501e-1 2.852e-1
First| | 985 | 986 | 987 | 988 | 989 | 990 | 991 | 992 | 993 |Next >> |



Page 993 of 993, showing 1 records out of 19841 total, starting on record 19841, ending on 19841


Download full differential expression gene result:


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