Differential expression result

The differential expression result was calculated using the comparison BMSC_gold of data set GSE20431.


With the default cutt-offs adjusted P-value <=0.05 and abs[logFC] >=0.585 or abs(FC) >=1.5, there are 0 genes in RED detected as differentially expressed genes (DEGs). The genes were ordered by ascending Adj_P_Value.



Table columns explanation:


Ensembl ID - Ensembl gene identifier based on Ensembl database.


HGNC automatic name and HGNC curated name - Most human genes have an associated HGNC symbol from the HUGO Gene Nomenclature Committee. If the gene or transcript comes from the Ensembl Genebuild's automated pipeline only, the HGNC symbol will have HGNC automatic associated with it. If it is a manually curated transcript from Havana/Vega, it will have HGNC curated associated with it. (Ref: link).


log2_fold_change - log2 value of the fold change (FC) in expression between sample groups. E.g. 1 means that one group had on average half the expression of the other group. -1 reverses the direction of the comparison.


AveExpr - average (log2) expression value across both sample groups. (*Available for one channel data.)


Adj_P_Value - P value for differential expression adjusted using the Benjamini-Hochberg correction to control the false discovery rate (FDR).



Page 1 of 326, showing 20 records out of 6515 total, starting on record 1, ending on 20.


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Ensembl ID HGNC automatic name HGNC curated name log2_fold_change Adj_P_Value
1 ENSG00000099795 NDUFB7 7.679e-2 9.976e-1
2 ENSG00000101811 CSTF2 -3.495e+0 9.976e-1
3 ENSG00000163739 CXCL1 -5.205e-2 9.976e-1
4 ENSG00000120087 HOXB7 1.175e+0 9.976e-1
5 ENSG00000168291 PDHB -7.483e-3 9.976e-1
6 ENSG00000111321 LTBR -8.737e-1 9.976e-1
7 ENSG00000090534 THPO -6.563e-1 9.976e-1
8 ENSG00000169032 MAP2K1 6.560e-2 9.976e-1
9 ENSG00000111652 COPS7A 6.138e-1 9.976e-1
10 ENSG00000015592 STMN4 -2.432e+0 9.976e-1
11 ENSG00000123066 MED13L -7.171e-1 9.976e-1
12 ENSG00000172023 REG1B 1.855e-1 9.976e-1
13 ENSG00000100764 PSMC1 -1.829e-1 9.976e-1
14 ENSG00000168496 FEN1 8.083e-3 9.993e-1
15 ENSG00000133641 C12orf29 -4.884e-1 9.976e-1
16 ENSG00000170296 GABARAP -6.435e-1 9.976e-1
17 ENSG00000197329 PELI1 3.211e-2 9.976e-1
18 ENSG00000198794 SCAMP5 -7.033e-1 9.976e-1
19 ENSG00000144659 SLC25A38 -2.106e-1 9.976e-1
20 ENSG00000136444 RSAD1 -1.297e+0 9.976e-1
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Page 1 of 326, showing 20 records out of 6515 total, starting on record 1, ending on 20


Download full differential expression gene result:


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