Differential expression result

The differential expression result was calculated using the comparison HMDM_TiO6h1_notreatment6h0 of data set GSE39316-HMDM.


With the default cutt-offs adjusted P-value <=0.05 and abs[logFC] >=0.585 or abs(FC) >=1.5, there are 0 genes in RED detected as differentially expressed genes (DEGs). The genes were ordered by ascending Adj_P_Value.



Table columns explanation:


Ensembl ID - Ensembl gene identifier based on Ensembl database.


HGNC automatic name and HGNC curated name - Most human genes have an associated HGNC symbol from the HUGO Gene Nomenclature Committee. If the gene or transcript comes from the Ensembl Genebuild's automated pipeline only, the HGNC symbol will have HGNC automatic associated with it. If it is a manually curated transcript from Havana/Vega, it will have HGNC curated associated with it. (Ref: link).


log2_fold_change - log2 value of the fold change (FC) in expression between sample groups. E.g. 1 means that one group had on average half the expression of the other group. -1 reverses the direction of the comparison.


AveExpr - average (log2) expression value across both sample groups. (*Available for one channel data.)


Adj_P_Value - P value for differential expression adjusted using the Benjamini-Hochberg correction to control the false discovery rate (FDR).



Page 1 of 852, showing 20 records out of 17029 total, starting on record 1, ending on 20.


| << Previous| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last
Ensembl ID HGNC automatic name HGNC curated name log2_fold_change AveExpr Adj_P_Value
1 ENSG00000156675 RAB11FIP1 3.293e-1 8.551e+0 9.993e-1
2 ENSG00000147324 MFHAS1 -2.848e-1 7.749e+0 9.993e-1
3 ENSG00000147642 -1.158e-1 7.217e+0 9.993e-1
4 ENSG00000140992 PDPK1 1.776e-1 8.143e+0 9.993e-1
5 ENSG00000117676 RPS6KA1 2.333e-1 8.590e+0 9.993e-1
6 ENSG00000037897 METTL1 -5.847e-1 8.508e+0 9.993e-1
7 ENSG00000076043 REXO2 2.911e-1 1.003e+1 9.993e-1
8 ENSG00000118620 ZNF430 -1.251e-1 7.404e+0 9.993e-1
9 ENSG00000167881 SRP68 -2.451e-1 9.834e+0 9.993e-1
10 ENSG00000197324 LRP10 4.257e-1 9.730e+0 9.993e-1
11 ENSG00000126749 EMG1 -2.761e-1 9.214e+0 9.993e-1
12 ENSG00000159131 GART -2.851e-1 8.854e+0 9.993e-1
13 ENSG00000013619 MAMLD1 -2.643e-1 7.666e+0 9.993e-1
14 ENSG00000179041 RRS1 -3.905e-1 8.272e+0 9.993e-1
15 ENSG00000161638 ITGA5 -4.730e-1 1.055e+1 9.993e-1
16 ENSG00000111196 MAGOHB -1.379e-1 7.295e+0 9.993e-1
17 ENSG00000082516 GEMIN5 -2.253e-1 7.705e+0 9.993e-1
18 ENSG00000178764 ZHX2 -2.731e-1 8.317e+0 9.993e-1
19 ENSG00000156218 ADAMTSL3 -1.459e-1 7.287e+0 9.993e-1
20 ENSG00000177076 ACER2 1.123e-1 7.261e+0 9.993e-1
| << Previous| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last



Page 1 of 852, showing 20 records out of 17029 total, starting on record 1, ending on 20


Download full differential expression gene result:


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