Differential expression result

The differential expression result was calculated using the comparison HMDM_ZnO6h1_notreatment6h0 of data set GSE39316-HMDM.


With the default cutt-offs adjusted P-value <=0.05 and abs[logFC] >=0.585 or abs(FC) >=1.5, there are 0 genes in RED detected as differentially expressed genes (DEGs). The genes were ordered by ascending Adj_P_Value.



Table columns explanation:


Ensembl ID - Ensembl gene identifier based on Ensembl database.


HGNC automatic name and HGNC curated name - Most human genes have an associated HGNC symbol from the HUGO Gene Nomenclature Committee. If the gene or transcript comes from the Ensembl Genebuild's automated pipeline only, the HGNC symbol will have HGNC automatic associated with it. If it is a manually curated transcript from Havana/Vega, it will have HGNC curated associated with it. (Ref: link).


log2_fold_change - log2 value of the fold change (FC) in expression between sample groups. E.g. 1 means that one group had on average half the expression of the other group. -1 reverses the direction of the comparison.


AveExpr - average (log2) expression value across both sample groups. (*Available for one channel data.)


Adj_P_Value - P value for differential expression adjusted using the Benjamini-Hochberg correction to control the false discovery rate (FDR).



Page 1 of 852, showing 20 records out of 17029 total, starting on record 1, ending on 20.


| << Previous| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last
Ensembl ID HGNC automatic name HGNC curated name log2_fold_change AveExpr Adj_P_Value
1 ENSG00000163735 CXCL5 1.684e+0 9.227e+0 1.662e-1
2 ENSG00000164949 GEM 5.686e-1 7.604e+0 1.662e-1
3 ENSG00000198142 ANKRD57 6.813e-1 9.361e+0 1.662e-1
4 ENSG00000214982 PARG 1.609e-1 7.419e+0 1.662e-1
5 ENSG00000197324 LRP10 5.474e-1 9.730e+0 2.427e-1
6 ENSG00000136158 SPRY2 5.070e-1 7.794e+0 2.427e-1
7 ENSG00000157557 ETS2 6.849e-1 9.619e+0 2.584e-1
8 ENSG00000075303 SLC25A40 3.694e-1 7.926e+0 2.683e-1
9 ENSG00000147144 CCDC120 -1.933e-1 7.718e+0 2.683e-1
10 ENSG00000132334 PTPRE 3.165e-1 9.450e+0 2.683e-1
11 ENSG00000088992 TESC -7.790e-1 8.385e+0 2.683e-1
12 ENSG00000187098 MITF 2.830e-1 7.920e+0 2.683e-1
13 ENSG00000102804 TSC22D1 4.497e-1 8.200e+0 2.683e-1
14 ENSG00000121671 CRY2 -3.327e-1 8.445e+0 2.683e-1
15 ENSG00000136717 BIN1 -6.321e-1 9.589e+0 2.683e-1
16 ENSG00000172113 NME6 -1.799e-1 8.376e+0 2.683e-1
17 ENSG00000168003 SLC3A2 7.717e-1 9.828e+0 2.795e-1
18 ENSG00000213397 UCHL5IP -2.591e-1 8.491e+0 2.828e-1
19 ENSG00000071462 WBSCR22 -3.550e-1 9.919e+0 2.828e-1
20 ENSG00000083845 RPS5 -3.473e-1 1.232e+1 2.828e-1
| << Previous| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last



Page 1 of 852, showing 20 records out of 17029 total, starting on record 1, ending on 20


Download full differential expression gene result:


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