Differential expression result

The differential expression result was calculated using the comparison MWCNT_vs_control_100_24h of data set GSE42066.


With the default cutt-offs adjusted P-value <=0.05 and abs[logFC] >=0.585 or abs(FC) >=1.5, there are 0 genes in RED detected as differentially expressed genes (DEGs). The genes were ordered by ascending Adj_P_Value.



Table columns explanation:


Ensembl ID - Ensembl gene identifier based on Ensembl database.


HGNC automatic name and HGNC curated name - Most human genes have an associated HGNC symbol from the HUGO Gene Nomenclature Committee. If the gene or transcript comes from the Ensembl Genebuild's automated pipeline only, the HGNC symbol will have HGNC automatic associated with it. If it is a manually curated transcript from Havana/Vega, it will have HGNC curated associated with it. (Ref: link).


log2_fold_change - log2 value of the fold change (FC) in expression between sample groups. E.g. 1 means that one group had on average half the expression of the other group. -1 reverses the direction of the comparison.


AveExpr - average (log2) expression value across both sample groups. (*Available for one channel data.)


Adj_P_Value - P value for differential expression adjusted using the Benjamini-Hochberg correction to control the false discovery rate (FDR).



Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20.


| << Previous| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last
Ensembl ID HGNC automatic name HGNC curated name log2_fold_change AveExpr Adj_P_Value
1 ENSG00000145321 GC 6.061e-1 4.348e+0 5.437e-2
2 ENSG00000140465 CYP1A1 -1.019e+0 7.051e+0 5.437e-2
3 ENSG00000129991 TNNI3 5.474e-1 6.724e+0 5.631e-2
4 ENSG00000151276 -3.709e-1 4.291e+0 1.960e-1
5 ENSG00000143140 GJA5 -3.569e-1 4.147e+0 3.584e-1
6 ENSG00000197756 RPL37A -4.960e-1 5.348e+0 3.584e-1
7 ENSG00000187066 3.516e-1 5.918e+0 3.584e-1
8 ENSG00000148702 HABP2 3.442e-1 6.252e+0 3.584e-1
9 ENSG00000111490 TBC1D30 -3.130e-1 6.484e+0 3.584e-1
10 ENSG00000148677 ANKRD1 -4.911e-1 4.800e+0 3.584e-1
11 ENSG00000105954 NPVF 3.536e-1 3.833e+0 4.882e-1
12 ENSG00000131620 ANO1 7.118e-1 4.298e+0 4.882e-1
13 ENSG00000134853 PDGFRA 5.122e-1 6.556e+0 4.882e-1
14 ENSG00000172867 KRT2 3.125e-1 4.097e+0 4.882e-1
15 ENSG00000187801 ZNF643 3.146e-1 3.659e+0 4.882e-1
16 ENSG00000166783 KIAA0430 -2.206e-1 8.330e+0 4.882e-1
17 ENSG00000158050 DUSP2 2.704e-1 6.618e+0 4.882e-1
18 ENSG00000118402 ELOVL4 -2.338e-1 3.415e+0 4.882e-1
19 ENSG00000139211 AMIGO2 2.523e-1 8.327e+0 4.882e-1
20 ENSG00000072364 AFF4 -3.649e-1 4.893e+0 4.882e-1
| << Previous| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last



Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20


Download full differential expression gene result:


<< back to Main Comparsions List | << go to Search DEGs List