Differential expression result

The differential expression result was calculated using the comparison MWCNT_vs_control_10_24h of data set GSE42066.


With the default cutt-offs adjusted P-value <=0.05 and abs[logFC] >=0.585 or abs(FC) >=1.5, there are 0 genes in RED detected as differentially expressed genes (DEGs). The genes were ordered by ascending Adj_P_Value.



Table columns explanation:


Ensembl ID - Ensembl gene identifier based on Ensembl database.


HGNC automatic name and HGNC curated name - Most human genes have an associated HGNC symbol from the HUGO Gene Nomenclature Committee. If the gene or transcript comes from the Ensembl Genebuild's automated pipeline only, the HGNC symbol will have HGNC automatic associated with it. If it is a manually curated transcript from Havana/Vega, it will have HGNC curated associated with it. (Ref: link).


log2_fold_change - log2 value of the fold change (FC) in expression between sample groups. E.g. 1 means that one group had on average half the expression of the other group. -1 reverses the direction of the comparison.


AveExpr - average (log2) expression value across both sample groups. (*Available for one channel data.)


Adj_P_Value - P value for differential expression adjusted using the Benjamini-Hochberg correction to control the false discovery rate (FDR).



Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20.


| << Previous| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last
Ensembl ID HGNC automatic name HGNC curated name log2_fold_change AveExpr Adj_P_Value
1 ENSG00000140465 CYP1A1 -6.170e-1 7.252e+0 7.576e-2
2 ENSG00000148935 GAS2 4.894e-1 7.710e+0 4.649e-1
3 ENSG00000138435 CHRNA1 -3.131e-1 4.421e+0 4.649e-1
4 ENSG00000174799 CEP135 2.985e-1 3.759e+0 6.145e-1
5 ENSG00000148730 EIF4EBP2 2.576e-1 7.444e+0 6.145e-1
6 ENSG00000105696 TMEM59L -2.594e-1 6.431e+0 6.145e-1
7 ENSG00000072858 SIDT1 -2.468e-1 3.830e+0 6.145e-1
8 ENSG00000135299 ANKRD6 2.857e-1 3.781e+0 6.145e-1
9 ENSG00000187990 HIST1H2BG 2.733e-1 7.046e+0 6.145e-1
10 ENSG00000119138 KLF9 -4.692e-1 4.178e+0 6.145e-1
11 ENSG00000171303 KCNK3 -3.453e-1 3.549e+0 6.145e-1
12 ENSG00000106631 MYL7 -2.452e-1 6.422e+0 6.145e-1
13 ENSG00000167332 OR51E2 -2.792e-1 4.992e+0 6.145e-1
14 ENSG00000211663 IGLV3-19 -2.083e-1 4.242e+0 6.145e-1
15 ENSG00000178860 MSC 2.788e-1 5.015e+0 6.145e-1
16 ENSG00000087299 L2HGDH 3.532e-1 7.067e+0 6.145e-1
17 ENSG00000154917 RAB6B -2.209e-1 6.809e+0 6.145e-1
18 ENSG00000187688 TRPV2 -2.724e-1 5.485e+0 6.145e-1
19 ENSG00000182289 -4.487e-1 4.638e+0 6.145e-1
20 ENSG00000227118 2.950e-1 5.400e+0 6.145e-1
| << Previous| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last



Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20


Download full differential expression gene result:


<< back to Main Comparsions List | << go to Search DEGs List