Differential expression result

The differential expression result was calculated using the comparison MWCNT_vs_control_100_24h of data set GSE42067.


With the default cutt-offs adjusted P-value <=0.05 and abs[logFC] >=0.585 or abs(FC) >=1.5, there are 0 genes in RED detected as differentially expressed genes (DEGs). The genes were ordered by ascending Adj_P_Value.



Table columns explanation:


Ensembl ID - Ensembl gene identifier based on Ensembl database.


HGNC automatic name and HGNC curated name - Most human genes have an associated HGNC symbol from the HUGO Gene Nomenclature Committee. If the gene or transcript comes from the Ensembl Genebuild's automated pipeline only, the HGNC symbol will have HGNC automatic associated with it. If it is a manually curated transcript from Havana/Vega, it will have HGNC curated associated with it. (Ref: link).


log2_fold_change - log2 value of the fold change (FC) in expression between sample groups. E.g. 1 means that one group had on average half the expression of the other group. -1 reverses the direction of the comparison.


AveExpr - average (log2) expression value across both sample groups. (*Available for one channel data.)


Adj_P_Value - P value for differential expression adjusted using the Benjamini-Hochberg correction to control the false discovery rate (FDR).



Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20.


| << Previous| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last
Ensembl ID HGNC automatic name HGNC curated name log2_fold_change AveExpr Adj_P_Value
1 ENSG00000213347 MXD3 -4.689e-1 9.281e+0 9.947e-1
2 ENSG00000162733 DDR2 3.918e-1 5.648e+0 9.947e-1
3 ENSG00000229689 4.226e-1 5.293e+0 9.947e-1
4 ENSG00000109819 PPARGC1A -3.492e-1 8.053e+0 9.947e-1
5 ENSG00000165417 GTF2A1 3.042e-1 6.005e+0 9.947e-1
6 ENSG00000112818 MEP1A -5.102e-1 3.585e+0 9.947e-1
7 ENSG00000164399 IL3 3.964e-1 3.518e+0 9.947e-1
8 ENSG00000011201 KAL1 -3.274e-1 4.239e+0 9.947e-1
9 ENSG00000197312 DDI2 -3.102e-1 5.924e+0 9.947e-1
10 ENSG00000075303 SLC25A40 3.035e-1 7.465e+0 9.947e-1
11 ENSG00000106565 TMEM176B -3.687e-1 5.339e+0 9.947e-1
12 ENSG00000241106 -3.391e-1 5.266e+0 9.947e-1
13 ENSG00000071575 TRIB2 -2.823e-1 5.899e+0 9.947e-1
14 ENSG00000172940 SLC22A13 3.166e-1 4.700e+0 9.947e-1
15 ENSG00000105246 EBI3 -5.437e-1 5.213e+0 9.947e-1
16 ENSG00000106689 LHX2 3.811e-1 3.876e+0 9.947e-1
17 ENSG00000134215 VAV3 -3.129e-1 4.614e+0 9.947e-1
18 ENSG00000183091 NEB -3.772e-1 5.583e+0 9.947e-1
19 ENSG00000212128 TAS2R13 2.528e-1 3.598e+0 9.947e-1
20 ENSG00000158473 CD1D -3.699e-1 7.221e+0 9.947e-1
| << Previous| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last



Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20


Download full differential expression gene result:


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