Differential expression result

The differential expression result was calculated using the comparison MWCNT_vs_control_10_24h of data set GSE42067.


With the default cutt-offs adjusted P-value <=0.05 and abs[logFC] >=0.585 or abs(FC) >=1.5, there are 0 genes in RED detected as differentially expressed genes (DEGs). The genes were ordered by ascending Adj_P_Value.



Table columns explanation:


Ensembl ID - Ensembl gene identifier based on Ensembl database.


HGNC automatic name and HGNC curated name - Most human genes have an associated HGNC symbol from the HUGO Gene Nomenclature Committee. If the gene or transcript comes from the Ensembl Genebuild's automated pipeline only, the HGNC symbol will have HGNC automatic associated with it. If it is a manually curated transcript from Havana/Vega, it will have HGNC curated associated with it. (Ref: link).


log2_fold_change - log2 value of the fold change (FC) in expression between sample groups. E.g. 1 means that one group had on average half the expression of the other group. -1 reverses the direction of the comparison.


AveExpr - average (log2) expression value across both sample groups. (*Available for one channel data.)


Adj_P_Value - P value for differential expression adjusted using the Benjamini-Hochberg correction to control the false discovery rate (FDR).



Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20.


| << Previous| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last
Ensembl ID HGNC automatic name HGNC curated name log2_fold_change AveExpr Adj_P_Value
1 ENSG00000134215 VAV3 -4.460e-1 4.547e+0 9.993e-1
2 ENSG00000033327 GAB2 -5.388e-1 6.806e+0 9.993e-1
3 ENSG00000127688 GAN -4.125e-1 3.448e+0 9.993e-1
4 ENSG00000122122 SASH3 3.973e-1 5.217e+0 9.993e-1
5 ENSG00000196090 PTPRT 2.941e-1 4.452e+0 9.993e-1
6 ENSG00000100024 UPB1 -3.978e-1 4.842e+0 9.993e-1
7 ENSG00000203685 C1orf95 3.148e-1 4.878e+0 9.993e-1
8 ENSG00000141086 CTRL 3.803e-1 4.852e+0 9.993e-1
9 ENSG00000104371 DKK4 3.128e-1 4.593e+0 9.993e-1
10 ENSG00000158473 CD1D -3.258e-1 7.243e+0 9.993e-1
11 ENSG00000213347 MXD3 -4.995e-1 9.265e+0 9.993e-1
12 ENSG00000053438 NNAT 3.135e-1 5.091e+0 9.993e-1
13 ENSG00000162733 DDR2 3.082e-1 5.607e+0 9.993e-1
14 ENSG00000109158 GABRA4 5.779e-1 3.971e+0 9.993e-1
15 ENSG00000005471 ABCB4 2.696e-1 3.753e+0 9.993e-1
16 ENSG00000160654 CD3G -3.651e-1 4.295e+0 9.993e-1
17 ENSG00000250722 -3.114e-1 4.295e+0 9.993e-1
18 ENSG00000089050 RBBP9 -3.043e-1 4.474e+0 9.993e-1
19 ENSG00000101605 MYOM1 -2.980e-1 5.259e+0 9.993e-1
20 ENSG00000072694 FCGR2B -5.060e-1 3.915e+0 9.993e-1
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Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20


Download full differential expression gene result:


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