Differential expression result

The differential expression result was calculated using the comparison TiO2-NB_vs_control_10_24h of data set GSE42067.


With the default cutt-offs adjusted P-value <=0.05 and abs[logFC] >=0.585 or abs(FC) >=1.5, there are 0 genes in RED detected as differentially expressed genes (DEGs). The genes were ordered by ascending Adj_P_Value.



Table columns explanation:


Ensembl ID - Ensembl gene identifier based on Ensembl database.


HGNC automatic name and HGNC curated name - Most human genes have an associated HGNC symbol from the HUGO Gene Nomenclature Committee. If the gene or transcript comes from the Ensembl Genebuild's automated pipeline only, the HGNC symbol will have HGNC automatic associated with it. If it is a manually curated transcript from Havana/Vega, it will have HGNC curated associated with it. (Ref: link).


log2_fold_change - log2 value of the fold change (FC) in expression between sample groups. E.g. 1 means that one group had on average half the expression of the other group. -1 reverses the direction of the comparison.


AveExpr - average (log2) expression value across both sample groups. (*Available for one channel data.)


Adj_P_Value - P value for differential expression adjusted using the Benjamini-Hochberg correction to control the false discovery rate (FDR).



Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20.


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Ensembl ID HGNC automatic name HGNC curated name log2_fold_change AveExpr Adj_P_Value
1 ENSG00000168152 THAP9 -7.001e-1 4.139e+0 1.204e-1
2 ENSG00000125355 FAM70A -6.122e-1 4.927e+0 1.674e-1
3 ENSG00000027869 SH2D2A 5.460e-1 5.954e+0 1.674e-1
4 ENSG00000122756 CNTFR 5.188e-1 6.941e+0 1.674e-1
5 ENSG00000147596 PRDM14 5.493e-1 5.103e+0 1.674e-1
6 ENSG00000131096 PYY 4.163e-1 5.020e+0 1.674e-1
7 ENSG00000166090 IL25 4.267e-1 5.208e+0 1.674e-1
8 ENSG00000100448 CTSG 5.375e-1 6.291e+0 1.674e-1
9 ENSG00000172156 CCL11 4.527e-1 3.252e+0 1.674e-1
10 ENSG00000135636 DYSF 5.884e-1 7.108e+0 1.674e-1
11 ENSG00000197410 DCHS2 4.110e-1 4.059e+0 1.674e-1
12 ENSG00000171444 MCC 5.279e-1 6.029e+0 1.674e-1
13 ENSG00000169006 NTSR2 4.732e-1 4.392e+0 1.674e-1
14 ENSG00000235072 -6.478e-1 6.556e+0 1.674e-1
15 ENSG00000198049 AVPR1B 4.265e-1 6.915e+0 1.674e-1
16 ENSG00000163464 IL8RA 4.046e-1 7.653e+0 1.674e-1
17 ENSG00000078018 MAP2 -4.754e-1 5.601e+0 1.674e-1
18 ENSG00000089356 FXYD3 4.598e-1 6.224e+0 1.674e-1
19 ENSG00000118298 CA14 4.829e-1 6.418e+0 1.674e-1
20 ENSG00000111732 AICDA 4.164e-1 3.070e+0 1.674e-1
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Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20


Download full differential expression gene result:


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