Differential expression result

The differential expression result was calculated using the comparison MWCNT_vs_control_10_24h of data set GSE42068.


With the default cutt-offs adjusted P-value <=0.05 and abs[logFC] >=0.585 or abs(FC) >=1.5, there are 0 genes in RED detected as differentially expressed genes (DEGs). The genes were ordered by ascending Adj_P_Value.



Table columns explanation:


Ensembl ID - Ensembl gene identifier based on Ensembl database.


HGNC automatic name and HGNC curated name - Most human genes have an associated HGNC symbol from the HUGO Gene Nomenclature Committee. If the gene or transcript comes from the Ensembl Genebuild's automated pipeline only, the HGNC symbol will have HGNC automatic associated with it. If it is a manually curated transcript from Havana/Vega, it will have HGNC curated associated with it. (Ref: link).


log2_fold_change - log2 value of the fold change (FC) in expression between sample groups. E.g. 1 means that one group had on average half the expression of the other group. -1 reverses the direction of the comparison.


AveExpr - average (log2) expression value across both sample groups. (*Available for one channel data.)


Adj_P_Value - P value for differential expression adjusted using the Benjamini-Hochberg correction to control the false discovery rate (FDR).



Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20.


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Ensembl ID HGNC automatic name HGNC curated name log2_fold_change AveExpr Adj_P_Value
1 ENSG00000129277 CCL4 6.964e-1 9.743e+0 7.989e-1
2 ENSG00000174417 TRHR -5.549e-1 3.842e+0 7.989e-1
3 ENSG00000162692 VCAM1 1.152e+0 6.085e+0 7.989e-1
4 ENSG00000131398 KCNC3 -4.911e-1 5.236e+0 9.122e-1
5 ENSG00000135919 SERPINE2 4.512e-1 1.137e+1 9.994e-1
6 ENSG00000169245 CXCL10 9.724e-1 7.003e+0 9.994e-1
7 ENSG00000188295 ZNF669 4.217e-1 6.089e+0 9.994e-1
8 ENSG00000078081 LAMP3 7.117e-1 3.974e+0 9.994e-1
9 ENSG00000118242 MREG 6.209e-1 7.413e+0 9.994e-1
10 ENSG00000137948 BRDT 5.576e-1 3.193e+0 9.994e-1
11 ENSG00000138061 CYP1B1 -5.690e-1 9.877e+0 9.994e-1
12 ENSG00000178732 GP5 3.999e-1 3.366e+0 9.994e-1
13 ENSG00000113504 SLC12A7 -5.503e-1 8.367e+0 9.994e-1
14 ENSG00000074706 IPCEF1 -3.885e-1 9.563e+0 9.994e-1
15 ENSG00000172575 RASGRP1 3.474e-1 3.533e+0 9.994e-1
16 ENSG00000169344 UMOD -4.627e-1 5.398e+0 9.994e-1
17 ENSG00000112812 PRSS16 -7.199e-1 4.201e+0 9.994e-1
18 ENSG00000137965 IFI44 5.700e-1 7.913e+0 9.994e-1
19 ENSG00000198125 MB -6.096e-1 5.890e+0 9.994e-1
20 ENSG00000077420 APBB1IP -4.475e-1 5.508e+0 9.994e-1
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Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20


Download full differential expression gene result:


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