Differential expression result

The differential expression result was calculated using the comparison TiO2-NB_vs_control_100_1h of data set GSE42068.


With the default cutt-offs adjusted P-value <=0.05 and abs[logFC] >=0.585 or abs(FC) >=1.5, there are 0 genes in RED detected as differentially expressed genes (DEGs). The genes were ordered by ascending Adj_P_Value.



Table columns explanation:


Ensembl ID - Ensembl gene identifier based on Ensembl database.


HGNC automatic name and HGNC curated name - Most human genes have an associated HGNC symbol from the HUGO Gene Nomenclature Committee. If the gene or transcript comes from the Ensembl Genebuild's automated pipeline only, the HGNC symbol will have HGNC automatic associated with it. If it is a manually curated transcript from Havana/Vega, it will have HGNC curated associated with it. (Ref: link).


log2_fold_change - log2 value of the fold change (FC) in expression between sample groups. E.g. 1 means that one group had on average half the expression of the other group. -1 reverses the direction of the comparison.


AveExpr - average (log2) expression value across both sample groups. (*Available for one channel data.)


Adj_P_Value - P value for differential expression adjusted using the Benjamini-Hochberg correction to control the false discovery rate (FDR).



Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20.


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Ensembl ID HGNC automatic name HGNC curated name log2_fold_change AveExpr Adj_P_Value
1 ENSG00000237521 -1.094e+0 5.231e+0 1.837e-1
2 ENSG00000174990 CA5A 5.951e-1 5.696e+0 1.837e-1
3 ENSG00000186912 P2RY4 -5.603e-1 5.063e+0 1.837e-1
4 ENSG00000170820 FSHR -5.911e-1 4.296e+0 1.837e-1
5 ENSG00000159917 ZNF235 5.739e-1 6.402e+0 2.014e-1
6 ENSG00000090920 FCGBP -7.891e-1 3.997e+0 2.014e-1
7 ENSG00000139218 SFRS2IP -7.778e-1 9.455e+0 2.014e-1
8 ENSG00000197061 HIST1H4C -1.231e+0 8.785e+0 2.014e-1
9 ENSG00000214944 -5.895e-1 5.241e+0 2.014e-1
10 ENSG00000165841 CYP2C19 -6.332e-1 4.025e+0 2.014e-1
11 ENSG00000122386 ZNF205 5.446e-1 6.517e+0 2.014e-1
12 ENSG00000169926 KLF13 -5.482e-1 8.181e+0 2.014e-1
13 ENSG00000178522 AMBN -5.587e-1 5.330e+0 2.014e-1
14 ENSG00000170290 SLN -4.797e-1 5.114e+0 2.014e-1
15 ENSG00000128276 RFPL3 -6.165e-1 6.762e+0 2.014e-1
16 ENSG00000114737 CISH -5.189e-1 6.759e+0 2.014e-1
17 ENSG00000225670 -6.064e-1 5.158e+0 2.014e-1
18 ENSG00000184984 CHRM5 -6.383e-1 4.395e+0 2.014e-1
19 ENSG00000197372 ZNF675 5.634e-1 3.244e+0 2.014e-1
20 ENSG00000070366 SMG6 -4.716e-1 6.388e+0 2.014e-1
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Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20


Download full differential expression gene result:


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