Differential expression result

The differential expression result was calculated using the comparison MWCNT_vs_vehicle_control_48h_with_IL-13 of data set GSE43515.


With the default cutt-offs adjusted P-value <=0.05 and abs[logFC] >=0.585 or abs(FC) >=1.5, there are 670 genes in RED detected as differentially expressed genes (DEGs). The genes were ordered by ascending Adj_P_Value.



Table columns explanation:


Ensembl ID - Ensembl gene identifier based on Ensembl database.


HGNC automatic name and HGNC curated name - Most human genes have an associated HGNC symbol from the HUGO Gene Nomenclature Committee. If the gene or transcript comes from the Ensembl Genebuild's automated pipeline only, the HGNC symbol will have HGNC automatic associated with it. If it is a manually curated transcript from Havana/Vega, it will have HGNC curated associated with it. (Ref: link).


log2_fold_change - log2 value of the fold change (FC) in expression between sample groups. E.g. 1 means that one group had on average half the expression of the other group. -1 reverses the direction of the comparison.


AveExpr - average (log2) expression value across both sample groups. (*Available for one channel data.)


Adj_P_Value - P value for differential expression adjusted using the Benjamini-Hochberg correction to control the false discovery rate (FDR).



Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20.


| << Previous| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | | Last
Ensembl ID HGNC automatic name HGNC curated name log2_fold_change AveExpr Adj_P_Value
1 ENSG00000149968 MMP3 -2.791e+0 7.696e+0 5.568e-6
2 ENSG00000187837 HIST1H1C -2.344e+0 9.118e+0 8.672e-5
3 ENSG00000166803 KIAA0101 -2.056e+0 8.170e+0 8.672e-5
4 ENSG00000121769 FABP3 -3.045e+0 7.443e+0 8.672e-5
5 ENSG00000167900 TK1 -1.700e+0 7.380e+0 8.672e-5
6 ENSG00000181019 NQO1 -1.806e+0 1.155e+1 8.672e-5
7 ENSG00000189056 RELN -1.834e+0 8.608e+0 1.191e-4
8 ENSG00000160211 G6PD -1.618e+0 1.129e+1 1.191e-4
9 ENSG00000172061 LRRC15 -1.547e+0 8.812e+0 1.191e-4
10 ENSG00000103175 WFDC1 -2.741e+0 8.411e+0 1.191e-4
11 ENSG00000171345 KRT19 -2.698e+0 6.726e+0 1.529e-4
12 ENSG00000196154 S100A4 -1.611e+0 1.239e+1 1.672e-4
13 ENSG00000145022 TCTA -1.687e+0 8.675e+0 1.904e-4
14 ENSG00000169583 CLIC3 -2.149e+0 5.716e+0 2.699e-4
15 ENSG00000077312 SNRPA -1.292e+0 9.116e+0 2.699e-4
16 ENSG00000127951 FGL2 -1.625e+0 8.383e+0 2.753e-4
17 ENSG00000163931 TKT -1.328e+0 1.158e+1 2.753e-4
18 ENSG00000166592 RRAD -1.289e+0 7.368e+0 3.370e-4
19 ENSG00000184254 ALDH1A3 2.143e+0 1.034e+1 3.674e-4
20 ENSG00000095303 PTGS1 -1.470e+0 9.681e+0 3.706e-4
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Page 1 of 590, showing 20 records out of 11800 total, starting on record 1, ending on 20


Download full differential expression gene result:


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